Single cell reconstruction of lineages and variability in C. elegansĭecoding lineage and fate specification in the C. Packer JS, Zhu Q, Huynh C, Sivaramakrishnan P, Preston E, Dueck H, Stefanik D, Tan K, Trapnell C, Kim J, Waterston RH, Murray JIĬreating Comprehensive Maps of Worm and Fly Transcription Factor Binding SitesĪutomated single cell expression analysis in C. Please note that the GSM2599701 (in GSE98561) raw data was re-analyzed and the resulting (processed) data is linked to the GSM4318946 records, which is duplicated sample record of GSM2599701 (with the re-analysis details) for the convenient retrieval of the complete raw data from SRA. ![]() elegans embryos at varying developmental stages (~100-650 minutes post first cleavage). Single cell RNA-seq profiles of cells from C. Using these annotations, we investigate the competing influences of cell lineage and cell fate on gene expression. elegans cell lineage) and approximate developmental age of each cell in the single cell data. We identify the lineage (from the invariant C. elegans embryos, spanning from gastrulation to the beginning of cuticle synthesis. We sequence the transcriptomes of 86,024 single cells from C. ![]() elegans embryogenesis at single cell resolutionĮxpression profiling by high throughput sequencing Bleach- COMPLETE Topics bleach, complete Language French. GEO help: Mouse over screen elements for information.Ī lineage-resolved molecular atlas of C.
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